PAS结构域

PAS折叠
细菌的氧气感受蛋白fixL的PAS结构域的晶体结构[1]。蛋白以飘带图展示,其中N-末端为蓝色,C-末端为红色,中间为血红素
鑑定
標誌PAS
PfamPF00989(旧版)
InterPro英语InterProIPR013767
SMART英语Simple Modular Architecture Research ToolPAS
PROSITE英语PROSITEPDOC50112
SCOP英语Structural Classification of Proteins2phy / SUPFAM
CDD英语Conserved Domain Databasecd00130
現有可用的蛋白結構:
Pfam結構(旧版) / ECOD
PDBRCSB PDB; PDBe; PDBj
PDBsum英语PDBsum結構概要
PDB1byw, 1d06, 1d7e, 1dp6, 1dp8, 1dp9, 1drm, 1ew0, 1f98, 1f9i, 1gsv, 1gsw, 1gsx, 1kou, 1ll8, 1lsv, 1lsw, 1lsx, 1lt0, 1mzu, 1nwz, 1odv, 1ot6, 1ot9, 1ota, 1otb, 1otd, 1ote, 1oti, 1s1y, 1s1z, 1s4r, 1s4s, 1s66, 1s67, 1t18, 1t19, 1t1a, 1t1b, 1t1c, 1ts0, 1ts6, 1ts7, 1ts8, 1ugu, 1uwn, 1uwp, 1v9y, 1v9z, 1vb6, 1wa9, 1xfn, 1xfq, 1xj2, 1xj3, 1xj4, 1xj6, 1y28, 2d01, 2d02, 2phy, 2pyp, 2pyr, 3phy, 3pyp

PAS结构域(英語:PAS domain)也称为PAS折叠(英語:PAS fold)是一种在细菌古菌真核生物中都存在的蛋白质结构域[2]。其功能为检测小分子物质,如检测氧气的EPAS1等[3][4][5]

参考文献

  1. ^ PDB 1y28; Dunham CM, Dioum EM, Tuckerman JR, Gonzalez G, Scott WG, Gilles-Gonzalez MA. A distal arginine in oxygen-sensing heme-PAS domains is essential to ligand binding, signal transduction, and structure. Biochemistry. July 2003, 42 (25): 7701–8 [2023-01-04]. PMID 12820879. doi:10.1021/bi0343370. (原始内容存档于2023-01-20). 
  2. ^ Henry, Jonathan T.; Crosson, Sean. Ligand-binding PAS domains in a genomic, cellular, and structural context. Annual Review of Microbiology. 1 January 2011, 65: 261–286. PMC 3298442可免费查阅. PMID 21663441. doi:10.1146/annurev-micro-121809-151631. 
  3. ^ Liu, Yu C.; Machuca, Mayra A.; Beckham, Simone A.; Gunzburg, Menachem J.; Roujeinikova, Anna. Structural basis for amino-acid recognition and transmembrane signalling by tandem Per-Arnt-Sim (tandem PAS) chemoreceptor sensory domains. Acta Crystallographica Section D. 1 October 2015, 71 (10): 2127–2136. PMID 26457436. doi:10.1107/S139900471501384X. 
  4. ^ Möglich, Andreas; Ayers, Rebecca A.; Moffat, Keith. Structure and signaling mechanism of Per-ARNT-Sim domains. Structure. 14 October 2009, 17 (10): 1282–1294. PMC 3092527可免费查阅. PMID 19836329. doi:10.1016/j.str.2009.08.011. 
  5. ^ Hennig, Sven; Strauss, Holger M.; Vanselow, Katja; Yildiz, Özkan; Schulze, Sabrina; Arens, Julia; Kramer, Achim; Wolf, Eva. Structural and Functional Analyses of PAS Domain Interactions of the Clock Proteins Drosophila PERIOD and Mouse PERIOD2. PLOS Biology. 28 April 2009, 7 (4): e1000094. PMC 2671562可免费查阅. PMID 19402751. doi:10.1371/journal.pbio.1000094. 
  • 3H英语3H domain
  • ABM英语ABM domain
  • ACDC英语ACDC domain
  • ACT英语ACT domain
  • ADF-H英语ADF-H domain
  • ANTH英语ANTH domain
  • ARID英语ARID domain
  • BAR
  • BEN英语BEN domain
  • BESS英语BESS domain
  • BIR英语Inhibitor of apoptosis domain
  • BMC英语BMC domain
  • BPS英语BPS domain
  • BTB/POZ英语BTB/POZ domain
  • BZIP英语BZIP domain
  • C1英语C1 domain
  • C2英语C2 domain
  • Cache英语Cache domain
  • CBS英语CBS domain
  • CGI-121英语Kinase binding protein CGI-121
  • CRM英语CRM domain
  • CUB英语CUB domain
  • CUT英语CUT domain
  • CVNH英语CVNH domain
  • 死亡英语Death fold
    • CARD英语CARD domain
    • DD英语Death domain
    • DED英语Death effector domain
    • Pyrin英语Pyrin domain
  • DEP
  • DHHC英语DHHC domain
  • DHR1英语DHR1 domain
  • DHR2英语DHR2 domain
  • DM英语DM domain
  • EcoEI_R_C英语EcoEI R protein C-terminal domain
  • EF1英语EF1 guanine nucleotide exchange domain
  • ENTH
  • FGGY英语FGGY carbohydrate kinase family
  • FYVE英语FYVE domain
  • HEAT英语HEAT repeat
  • Kringle英语Kringle domain
  • LIM
  • LRR
  • NACHT英语NACHT domain
  • PAS
    • LOV英语Light-oxygen-voltage-sensing domain
  • PDZ英语PDZ domain
  • PH
  • PX
  • SH2
  • SH3
  • SUN
  • TRIO英语CRAL-TRIO domain
  • WD40英语WD40 repeat
  • X8
  • YTH英语YTH protein domain
  • 锌指